{
    "general": {
        "date": "2024-06-10 08:52:40",
        "title": "domcke_2020.fetal_heart.Stromal_cells",
        "description": "No description",
        "pipeline_ver": "v1.10.0",
        "pipeline_type": "atac",
        "genome": "hg19",
        "aligner": "bowtie2",
        "seq_endedness": {
            "rep1": {
                "paired_end": true
            }
        },
        "peak_caller": "macs2"
    },
    "align": {
        "frac_reads_in_annot": {
            "rep1": {
                "fri_dhs": 0.4150599353368697,
                "fri_blacklist": 0.0013612089478809773,
                "fri_prom": 0.17786439496592565,
                "fri_enh": 0.3653174498406344
            }
        }
    },
    "replication": {
        "reproducibility": {
            "overlap": {
                "Nt": 0,
                "N1": 218562,
                "Np": 0,
                "N_opt": 218562,
                "N_consv": 218562,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            },
            "idr": {
                "Nt": 0,
                "N1": 101902,
                "Np": 0,
                "N_opt": 101902,
                "N_consv": 101902,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            }
        },
        "num_peaks": {
            "rep1": {
                "num_peaks": 291648
            }
        }
    },
    "peak_stat": {
        "peak_region_size": {
            "rep1": {
                "min_size": 150.0,
                "25_pct": 386.0,
                "50_pct": 799.0,
                "75_pct": 1247.0,
                "max_size": 3353.0,
                "mean": 868.7167064406408
            },
            "idr_opt": {
                "min_size": 150.0,
                "25_pct": 1015.0,
                "50_pct": 1288.0,
                "75_pct": 1581.0,
                "max_size": 3353.0,
                "mean": 1319.844438774509
            },
            "overlap_opt": {
                "min_size": 150.0,
                "25_pct": 675.0,
                "50_pct": 1020.0,
                "75_pct": 1377.0,
                "max_size": 3353.0,
                "mean": 1058.5355185256358
            }
        }
    },
    "peak_enrich": {
        "frac_reads_in_peaks": {
            "macs2": {
                "rep1": {
                    "frip": 0.317138711507533
                },
                "rep1-pr1": {
                    "frip": 0.2994065319671105
                },
                "rep1-pr2": {
                    "frip": 0.30836712689265783
                }
            },
            "overlap": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.28773641312795534
                }
            },
            "idr": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.21513405101128125
                }
            }
        }
    }
}
