{
    "general": {
        "date": "2024-06-10 07:23:25",
        "title": "domcke_2020.fetal_heart.Myeloid_cells",
        "description": "No description",
        "pipeline_ver": "v1.10.0",
        "pipeline_type": "atac",
        "genome": "hg19",
        "aligner": "bowtie2",
        "seq_endedness": {
            "rep1": {
                "paired_end": true
            }
        },
        "peak_caller": "macs2"
    },
    "align": {
        "frac_reads_in_annot": {
            "rep1": {
                "fri_dhs": 0.4243327939570203,
                "fri_blacklist": 0.0014662304763582686,
                "fri_prom": 0.19230404009717483,
                "fri_enh": 0.34024543911048793
            }
        }
    },
    "replication": {
        "reproducibility": {
            "overlap": {
                "Nt": 0,
                "N1": 73483,
                "Np": 0,
                "N_opt": 73483,
                "N_consv": 73483,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            },
            "idr": {
                "Nt": 0,
                "N1": 36611,
                "Np": 0,
                "N_opt": 36611,
                "N_consv": 36611,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            }
        },
        "num_peaks": {
            "rep1": {
                "num_peaks": 178762
            }
        }
    },
    "peak_stat": {
        "peak_region_size": {
            "rep1": {
                "min_size": 150.0,
                "25_pct": 157.0,
                "50_pct": 271.0,
                "75_pct": 500.0,
                "max_size": 2657.0,
                "mean": 400.7919356462783
            },
            "idr_opt": {
                "min_size": 150.0,
                "25_pct": 622.0,
                "50_pct": 859.0,
                "75_pct": 1097.0,
                "max_size": 2657.0,
                "mean": 872.9320695965694
            },
            "overlap_opt": {
                "min_size": 150.0,
                "25_pct": 354.0,
                "50_pct": 576.0,
                "75_pct": 895.0,
                "max_size": 2657.0,
                "mean": 651.7411782316999
            }
        }
    },
    "peak_enrich": {
        "frac_reads_in_peaks": {
            "macs2": {
                "rep1": {
                    "frip": 0.3078483607861474
                },
                "rep1-pr1": {
                    "frip": 0.3533782921521584
                },
                "rep1-pr2": {
                    "frip": 0.3444264987287087
                }
            },
            "overlap": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.2368613691226432
                }
            },
            "idr": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.18092128511123756
                }
            }
        }
    }
}
