{
    "general": {
        "date": "2024-06-10 07:52:52",
        "title": "domcke_2020.fetal_heart.Erythroblasts",
        "description": "No description",
        "pipeline_ver": "v1.10.0",
        "pipeline_type": "atac",
        "genome": "hg19",
        "aligner": "bowtie2",
        "seq_endedness": {
            "rep1": {
                "paired_end": true
            }
        },
        "peak_caller": "macs2"
    },
    "align": {
        "frac_reads_in_annot": {
            "rep1": {
                "fri_dhs": 0.36357156132516194,
                "fri_blacklist": 0.001702490626586254,
                "fri_prom": 0.15590061353197535,
                "fri_enh": 0.33502625259051527
            }
        }
    },
    "replication": {
        "reproducibility": {
            "overlap": {
                "Nt": 0,
                "N1": 80005,
                "Np": 0,
                "N_opt": 80005,
                "N_consv": 80005,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            },
            "idr": {
                "Nt": 0,
                "N1": 34139,
                "Np": 0,
                "N_opt": 34139,
                "N_consv": 34139,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            }
        },
        "num_peaks": {
            "rep1": {
                "num_peaks": 150468
            }
        }
    },
    "peak_stat": {
        "peak_region_size": {
            "rep1": {
                "min_size": 150.0,
                "25_pct": 187.0,
                "50_pct": 295.0,
                "75_pct": 635.0,
                "max_size": 2266.0,
                "mean": 464.8103782864131
            },
            "idr_opt": {
                "min_size": 150.0,
                "25_pct": 754.0,
                "50_pct": 996.0,
                "75_pct": 1215.0,
                "max_size": 2266.0,
                "mean": 986.0570022554849
            },
            "overlap_opt": {
                "min_size": 150.0,
                "25_pct": 350.0,
                "50_pct": 593.0,
                "75_pct": 977.0,
                "max_size": 2266.0,
                "mean": 685.9771514280358
            }
        }
    },
    "peak_enrich": {
        "frac_reads_in_peaks": {
            "macs2": {
                "rep1": {
                    "frip": 0.20444414205359723
                },
                "rep1-pr1": {
                    "frip": 0.21793624345713153
                },
                "rep1-pr2": {
                    "frip": 0.22019071350522978
                }
            },
            "overlap": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.1686696016535872
                }
            },
            "idr": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.12137348678037618
                }
            }
        }
    }
}
