{
    "general": {
        "date": "2024-06-10 08:33:36",
        "title": "domcke_2020.fetal_heart.Endocardial_cells",
        "description": "No description",
        "pipeline_ver": "v1.10.0",
        "pipeline_type": "atac",
        "genome": "hg19",
        "aligner": "bowtie2",
        "seq_endedness": {
            "rep1": {
                "paired_end": true
            }
        },
        "peak_caller": "macs2"
    },
    "align": {
        "frac_reads_in_annot": {
            "rep1": {
                "fri_dhs": 0.4106301544370718,
                "fri_blacklist": 0.001362846607592849,
                "fri_prom": 0.18084149239248895,
                "fri_enh": 0.3639327144694452
            }
        }
    },
    "replication": {
        "reproducibility": {
            "overlap": {
                "Nt": 0,
                "N1": 182649,
                "Np": 0,
                "N_opt": 182649,
                "N_consv": 182649,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            },
            "idr": {
                "Nt": 0,
                "N1": 80530,
                "Np": 0,
                "N_opt": 80530,
                "N_consv": 80530,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            }
        },
        "num_peaks": {
            "rep1": {
                "num_peaks": 280769
            }
        }
    },
    "peak_stat": {
        "peak_region_size": {
            "rep1": {
                "min_size": 150.0,
                "25_pct": 324.0,
                "50_pct": 670.0,
                "75_pct": 1161.0,
                "max_size": 3585.0,
                "mean": 794.1692672624115
            },
            "idr_opt": {
                "min_size": 150.0,
                "25_pct": 996.0,
                "50_pct": 1287.0,
                "75_pct": 1600.0,
                "max_size": 3585.0,
                "mean": 1319.612628833975
            },
            "overlap_opt": {
                "min_size": 150.0,
                "25_pct": 655.0,
                "50_pct": 995.0,
                "75_pct": 1370.0,
                "max_size": 3585.0,
                "mean": 1047.5065124911716
            }
        }
    },
    "peak_enrich": {
        "frac_reads_in_peaks": {
            "macs2": {
                "rep1": {
                    "frip": 0.30918384726428505
                },
                "rep1-pr1": {
                    "frip": 0.27321274718022714
                },
                "rep1-pr2": {
                    "frip": 0.289731515314078
                }
            },
            "overlap": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.2656049340985282
                }
            },
            "idr": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.19051708789275462
                }
            }
        }
    }
}
