{
    "general": {
        "date": "2024-06-10 01:42:58",
        "title": "ameen_2022.OFT",
        "description": "No description",
        "pipeline_ver": "v1.10.0",
        "pipeline_type": "atac",
        "genome": "hg38",
        "aligner": "bowtie2",
        "seq_endedness": {
            "rep1": {
                "paired_end": true
            }
        },
        "peak_caller": "macs2"
    },
    "align": {
        "frac_reads_in_annot": {
            "rep1": {
                "fri_dhs": 0.6076084241454348,
                "fri_blacklist": 0.0006506083775751263,
                "fri_prom": 0.3174767783507337,
                "fri_enh": 0.3638490571629368
            }
        }
    },
    "replication": {
        "reproducibility": {
            "overlap": {
                "Nt": 0,
                "N1": 103224,
                "Np": 0,
                "N_opt": 103224,
                "N_consv": 103224,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            },
            "idr": {
                "Nt": 0,
                "N1": 46214,
                "Np": 0,
                "N_opt": 46214,
                "N_consv": 46214,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            }
        },
        "num_peaks": {
            "rep1": {
                "num_peaks": 183151
            }
        }
    },
    "peak_stat": {
        "peak_region_size": {
            "rep1": {
                "min_size": 150.0,
                "25_pct": 177.0,
                "50_pct": 285.0,
                "75_pct": 544.0,
                "max_size": 2324.0,
                "mean": 406.34034212207416
            },
            "idr_opt": {
                "min_size": 150.0,
                "25_pct": 545.0,
                "50_pct": 749.0,
                "75_pct": 970.0,
                "max_size": 2324.0,
                "mean": 776.7759120612801
            },
            "overlap_opt": {
                "min_size": 150.0,
                "25_pct": 314.0,
                "50_pct": 490.0,
                "75_pct": 756.0,
                "max_size": 2324.0,
                "mean": 567.078973882043
            }
        }
    },
    "peak_enrich": {
        "frac_reads_in_peaks": {
            "macs2": {
                "rep1": {
                    "frip": 0.5111451215485051
                },
                "rep1-pr1": {
                    "frip": 0.519739036926021
                },
                "rep1-pr2": {
                    "frip": 0.5319347422968476
                }
            },
            "overlap": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.4447463399971211
                }
            },
            "idr": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.33119617954124014
                }
            }
        }
    }
}
