{
    "general": {
        "date": "2024-06-10 01:34:03",
        "title": "ameen_2022.FB2",
        "description": "No description",
        "pipeline_ver": "v1.10.0",
        "pipeline_type": "atac",
        "genome": "hg38",
        "aligner": "bowtie2",
        "seq_endedness": {
            "rep1": {
                "paired_end": true
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        },
        "peak_caller": "macs2"
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        "frac_reads_in_annot": {
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                "fri_dhs": 0.6139000321559286,
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                "fri_enh": 0.3221080160406341
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    },
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        "reproducibility": {
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                "Nt": 0,
                "N1": 79556,
                "Np": 0,
                "N_opt": 79556,
                "N_consv": 79556,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
                "rescue_ratio": 0.0,
                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            },
            "idr": {
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                "N1": 38178,
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                "N_opt": 38178,
                "N_consv": 38178,
                "opt_set": "rep1-pr1_vs_rep1-pr2",
                "consv_set": "rep1-pr1_vs_rep1-pr2",
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                "self_consistency_ratio": 1.0,
                "reproducibility": "pass"
            }
        },
        "num_peaks": {
            "rep1": {
                "num_peaks": 150255
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        }
    },
    "peak_stat": {
        "peak_region_size": {
            "rep1": {
                "min_size": 150.0,
                "25_pct": 157.0,
                "50_pct": 258.0,
                "75_pct": 518.0,
                "max_size": 2009.0,
                "mean": 381.1982496422748
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            "idr_opt": {
                "min_size": 150.0,
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                "mean": 735.4859866939075
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            "overlap_opt": {
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                "max_size": 2009.0,
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    },
    "peak_enrich": {
        "frac_reads_in_peaks": {
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                "rep1-pr1": {
                    "frip": 0.5527484688725487
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                "rep1-pr2": {
                    "frip": 0.551940696987596
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            },
            "overlap": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.4567533474888724
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            },
            "idr": {
                "rep1-pr1_vs_rep1-pr2": {
                    "frip": 0.36661184486430126
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        }
    }
}