Information for 12-GCTGTGAAAW (Motif 8)


Reverse Opposite:

p-value:1e-546
log p-value:-1.258e+03
Information Content per bp:1.576
Number of Target Sequences with motif48927.0
Percentage of Target Sequences with motif44.22%
Number of Background Sequences with motif40039.7
Percentage of Background Sequences with motif36.87%
Average Position of motif in Targets100.1 +/- 55.9bp
Average Position of motif in Background99.5 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCTGTGAAAW
GCTGTG----

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTGAAAW--
AAGACGCTGTAAAGCGA

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTGAAAW--
AAGACGCTGTAAAGCGA

PH0170.1_Tgif2/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTGAAAW-
AACTAGCTGTCAATAC

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GCTGTGAAAW--
AGGACGCTGTAAAGGGA

PH0169.1_Tgif1/Jaspar

Match Rank:6
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGTGAAAW--
NNNCAGCTGTCAATATN

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTGAAAW
NGCTN------

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCTGTGAAAW
GCTGTCAA--

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCTGTGAAAW
TGCTGACTCA-

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:10
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GCTGTGAAAW
CCTGCTGAGH---