Information for 10-RARCWGCTYT (Motif 5)


Reverse Opposite:

p-value:1e-720
log p-value:-1.659e+03
Information Content per bp:1.551
Number of Target Sequences with motif50985.0
Percentage of Target Sequences with motif46.08%
Number of Background Sequences with motif40832.0
Percentage of Background Sequences with motif37.60%
Average Position of motif in Targets99.9 +/- 55.5bp
Average Position of motif in Background100.0 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSC/MA0665.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:RARCWGCTYT-
-AACAGCTGTT

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:RARCWGCTYT-
---CAGCTGTT

Tcf21/MA0832.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-RARCWGCTYT---
NCAACAGCTGTTGC

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:RARCWGCTYT--
--ACAGCTGTTV

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:RARCWGCTYT--
--CCAGCTGTTN

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:RARCWGCTYT
----NGCTN-

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:RARCWGCTYT-
NNGCAGCTGTT

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RARCWGCTYT-------
AAGACGCTGTAAAGCGA

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RARCWGCTYT-------
AAGACGCTGTAAAGCGA

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-RARCWGCTYT-
NNAGCAGCTGCT