Information for 24-GTCTAGCGGT (Motif 22)


Reverse Opposite:

p-value:1e-74
log p-value:-1.707e+02
Information Content per bp:1.964
Number of Target Sequences with motif108.0
Percentage of Target Sequences with motif0.10%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.0 +/- 55.3bp
Average Position of motif in Background132.1 +/- 49.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GTCTAGCGGT--
---TTGCGGTTT

MYBL2/MA0777.1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTCTAGCGGT-
GACNGTTTAACGGTT

SMAD3/MA0795.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCTAGCGGT
TGTCTAGACG-

PB0046.1_Mybl1_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCTAGCGGT------
NNANTAACGGTTNNNAN

PB0045.1_Myb_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTCTAGCGGT------
NNNNTAACGGTTNNNAN

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCTAGCGGT
CTGTCTGG----

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTCTAGCGGT
VBSYGTCTGG----

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTCTAGCGGT
TWGTCTGV----

ZBTB33/MA0527.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTCTAGCGGT-----
CTCTCGCGAGATCTG

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GTCTAGCGGT-
NNTNNTGTCTGGNNTNG