Information for 21-TACTTAGCAGAC (Motif 21)


Reverse Opposite:

p-value:1e-75
log p-value:-1.738e+02
Information Content per bp:1.891
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif5.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets102.2 +/- 46.7bp
Average Position of motif in Background85.8 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0036.1_Gsx2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TACTTAGCAGAC
AGGTTAATTAGCTGAT

PH0131.1_Pax4/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TACTTAGCAGAC
TGAACTAATTAGCCCAC

PH0081.1_Pdx1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TACTTAGCAGAC
AAGGTAATTAGCTCAT

PH0045.1_Hoxa1/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TACTTAGCAGAC
ACGGTAATTAGCTCAG

PH0031.1_Evx1/Jaspar

Match Rank:5
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TACTTAGCAGAC
AGAACTAATTAGTGGAC

PH0032.1_Evx2/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----TACTTAGCAGAC
ANCGCTAATTAGCGGTN

PH0027.1_Emx2/Jaspar

Match Rank:7
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TACTTAGCAGAC
ACCACTAATTAGTGGAC

Hoxb5/MA0904.1/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TACTTAGCAGAC
ACGGTAATTAGCTCAT

PH0060.1_Hoxb5/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TACTTAGCAGAC
ACGGTAATTAGCTCAT

PH0155.1_Prrx2/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TACTTAGCAGAC
NTTCGCTAATTAGCTNT-