Information for 25-AATGGAAT (Motif 20)


Reverse Opposite:

p-value:1e-76
log p-value:-1.751e+02
Information Content per bp:1.973
Number of Target Sequences with motif59756.0
Percentage of Target Sequences with motif54.01%
Number of Background Sequences with motif55627.5
Percentage of Background Sequences with motif51.23%
Average Position of motif in Targets100.0 +/- 57.1bp
Average Position of motif in Background99.7 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.66
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:AATGGAAT--
NCTGGAATGC

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:AATGGAAT---
-NTGGAATGTN

TEAD3/MA0808.1/Jaspar

Match Rank:3
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:AATGGAAT--
--TGGAATGT

TEAD1/MA0090.2/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:AATGGAAT---
-NTGGAATGTG

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AATGGAAT--
NNTGGAAANN

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AATGGAAT--
AATGGAAAAT

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AATGGAAT--
AATGGAAAAT

PB0169.1_Sox15_2/Jaspar

Match Rank:8
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---AATGGAAT----
TTGAATGAAATTCGA

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:9
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AATGGAAT--
CCWGGAATGY

PB0098.1_Zfp410_1/Jaspar

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AATGGAAT------
TATTATGGGATGGATAA