Information for 23-TTGACAGGGA (Motif 19)


Reverse Opposite:

p-value:1e-87
log p-value:-2.022e+02
Information Content per bp:1.798
Number of Target Sequences with motif2422.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif1546.2
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets102.3 +/- 56.9bp
Average Position of motif in Background100.3 +/- 62.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TTGACAGGGA
TTGACAGC--

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTGACAGGGA
TTGACAGG--

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTGACAGGGA
TTGACAG---

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGACAGGGA---
GTATTGACAGGTNNTT

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TTGACAGGGA
RHTGWCAR---

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGACAGGGA---
NNNNTGCCAGTGATTG

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGACAGGGA---
NTATTGACAGGTNNTN

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTGACAGGGA---
NNATTGACAGGTGCTT

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTGACAGGGA---
NTATTGACAGCTNNTT

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTGACAGGGA
GGTGYTGACAGS--