Information for 18-ATCMSGCA (Motif 15)


Reverse Opposite:

p-value:1e-278
log p-value:-6.407e+02
Information Content per bp:1.620
Number of Target Sequences with motif27729.0
Percentage of Target Sequences with motif25.06%
Number of Background Sequences with motif22386.4
Percentage of Background Sequences with motif20.62%
Average Position of motif in Targets101.0 +/- 56.0bp
Average Position of motif in Background99.6 +/- 63.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

JDP2/MA0655.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATCMSGCA-
ATGACTCAT

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATCMSGCA
--CACGCA

NFE2/MA0841.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATCMSGCA--
CATGACTCATC

JUND/MA0491.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATCMSGCA--
NATGAGTCACN

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATCMSGCA-
GYCATCMATCAT

PBX1/MA0070.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATCMSGCA--
CCATCAATCAAA

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ATCMSGCA-
TBGCACGCAA

ATF4/MA0833.1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATCMSGCA---
GGATGATGCAATA

FOS/MA0476.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ATCMSGCA--
NATGAGTCANN

BATF::JUN/MA0462.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATCMSGCA
GAAATGACTCA