Information for 14-TTACAATGCAGA (Motif 14)


Reverse Opposite:

p-value:1e-304
log p-value:-7.005e+02
Information Content per bp:1.677
Number of Target Sequences with motif41979.0
Percentage of Target Sequences with motif37.94%
Number of Background Sequences with motif35416.6
Percentage of Background Sequences with motif32.62%
Average Position of motif in Targets99.7 +/- 56.1bp
Average Position of motif in Background100.1 +/- 61.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TTACAATGCAGA-
CTTTGTTATGCAAAT

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTACAATGCAGA-
CATTGTTATGCAAAT

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTACAATGCAGA----
---ATATGCAAATNNN

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TTACAATGCAGA-
---ATATGCAAAT

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TTACAATGCAGA-
---TTATGCAAAT

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TTACAATGCAGA--
----ATGCCAGACN

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TTACAATGCAGA----
----TATGCWAATBAV

Oct6(POU,Homeobox)/NPC-Oct6-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTACAATGCAGA----
----WATGCAAATGAG

PH0148.1_Pou3f3/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTACAATGCAGA----
TNNATTATGCATANNTT

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTACAATGCAGA-----
-TTGTATGCAAATTAGA