Information for 20-TWAAAATAGC (Motif 13)


Reverse Opposite:

p-value:1e-375
log p-value:-8.642e+02
Information Content per bp:1.636
Number of Target Sequences with motif4940.0
Percentage of Target Sequences with motif4.47%
Number of Background Sequences with motif2548.2
Percentage of Background Sequences with motif2.35%
Average Position of motif in Targets102.2 +/- 54.5bp
Average Position of motif in Background98.5 +/- 59.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--TWAAAATAGC
DCYAAAAATAGM

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.91
Offset:-4
Orientation:forward strand
Alignment:----TWAAAATAGC-
ATGCTAAAAATAGAA

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--TWAAAATAGC
GCTAAAAATAGC

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-TWAAAATAGC
CCAAAAATAG-

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--TWAAAATAGC
KCCAAAAATAGC

MEF2A/MA0052.3/Jaspar

Match Rank:6
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TWAAAATAGC
TCTAAAAATAGA

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TWAAAATAGC
GCTATAAATAGC

MEF2D/MA0773.1/Jaspar

Match Rank:8
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TWAAAATAGC
ACTATAAATAGA

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TWAAAATAGC
CCATATATGG-

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TWAAAATAGC----
GAAAAAATTGCAAGG