Information for 19-TTGCATAACA (Motif 12)


Reverse Opposite:

p-value:1e-394
log p-value:-9.076e+02
Information Content per bp:1.533
Number of Target Sequences with motif49120.0
Percentage of Target Sequences with motif44.40%
Number of Background Sequences with motif41408.6
Percentage of Background Sequences with motif38.14%
Average Position of motif in Targets99.9 +/- 56.1bp
Average Position of motif in Background100.3 +/- 60.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPA/MA0102.3/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-TTGCATAACA
ATTGCACAATA

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-TTGCATAACA
ATTGCATAA--

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TTGCATAACA---
ATTTGCATAACAATG

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:4
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TTGCATAACA---
ATTTGCATAACAAAG

HLF/MA0043.2/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TTGCATAACA
CATTACGTAACC

TEF/MA0843.1/Jaspar

Match Rank:6
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TTGCATAACA
TATTACGTAACA

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TTGCATAACA
ATTTGCATAA--

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TTGCATAACA--
CAATTGCAAAAATAT

NFIL3/MA0025.1/Jaspar

Match Rank:9
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TTGCATAACA
ANGTTACATAA--

DBP/MA0639.1/Jaspar

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TTGCATAACA
TATTACGTAACA