Information for 16-CGATTCAGAG (Motif 10)


Reverse Opposite:

p-value:1e-498
log p-value:-1.149e+03
Information Content per bp:1.533
Number of Target Sequences with motif27644.0
Percentage of Target Sequences with motif24.99%
Number of Background Sequences with motif20771.8
Percentage of Background Sequences with motif19.13%
Average Position of motif in Targets100.2 +/- 56.4bp
Average Position of motif in Background101.3 +/- 63.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOS::JUN/MA0099.2/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGATTCAGAG
TGAGTCA---

FOS/MA0476.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGATTCAGAG
NATGAGTCANN-

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGATTCAGAG
-NATTCAAAT

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGATTCAGAG---
GACCACATTCATACAAT

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGATTCAGAG
CGGTTTCAAA-

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CGATTCAGAG
GATGAGTCAT--

JUNB/MA0490.1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGATTCAGAG
GGATGACTCAT--

FOSL2/MA0478.1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGATTCAGAG
GGATGACTCAT--

PB0178.1_Sox8_2/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGATTCAGAG----
ACATTCATGACACG

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CGATTCAGAG
ATGASTCATH-