Information for 11-AMAGCACWGC (Motif 8)


Reverse Opposite:

p-value:1e-316
log p-value:-7.291e+02
Information Content per bp:1.601
Number of Target Sequences with motif22659.0
Percentage of Target Sequences with motif31.45%
Number of Background Sequences with motif17750.7
Percentage of Background Sequences with motif25.14%
Average Position of motif in Targets99.7 +/- 54.8bp
Average Position of motif in Background99.6 +/- 63.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---AMAGCACWGC----
NNNANTGCAGTGCNNTT

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AMAGCACWGC-
AAATCACAGCA

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----AMAGCACWGC---
NNNNTGAGCACTGTNNG

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AMAGCACWGC
AAATCACTGC

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AMAGCACWGC------
-GAGCACAGCAGGACA

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AMAGCACWGC
AAACCACAGC

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AMAGCACWGC
----CACAGN

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AMAGCACWGC
-CAGCC----

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AMAGCACWGC
GTCAGCANNTN

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AMAGCACWGC-
AAACCACAGAN