Information for 6-CGGAAACG (Motif 7)


Reverse Opposite:

p-value:1e-364
log p-value:-8.387e+02
Information Content per bp:1.477
Number of Target Sequences with motif40649.0
Percentage of Target Sequences with motif56.41%
Number of Background Sequences with motif34465.4
Percentage of Background Sequences with motif48.81%
Average Position of motif in Targets100.1 +/- 56.0bp
Average Position of motif in Background99.7 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.49
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAACG
NNTGGAAANN

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:2
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAACG
DCCGGAARYN

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAACG
AATGGAAAAT

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAACG
RCCGGAARYN

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAACG
RCCGGAAGTD

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CGGAAACG
TGGAAAA-

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CGGAAACG-
NDCAGGAARTNN

ELK4/MA0076.2/Jaspar

Match Rank:8
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAACG-
NCCGGAAGTGG

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CGGAAACG
AGAGGAA---

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CGGAAACG
ACCGGAAG--