Information for 23-GTGGAGGGCCTG (Motif 29)


Reverse Opposite:

p-value:1e-29
log p-value:-6.745e+01
Information Content per bp:1.985
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.7 +/- 66.4bp
Average Position of motif in Background129.9 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GTGGAGGGCCTG
GTGGAT------

GLIS1/MA0735.1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGAGGGCCTG
GCTTCGTGGGGGGTCT-

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTGGAGGGCCTG-----
--GGNGCGNCTGTTNNN

SP1/MA0079.3/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GTGGAGGGCCTG
GGGGGCGGGGC--

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGAGGGCCTG
GGGNGGGGGCGGGGC--

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GTGGAGGGCCTG-
-----AGGCCTAG

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GTGGAGGGCCTG
AGGGGGCGGGGCTG

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTGGAGGGCCTG
TGGGGAAGGGCM-

GLIS3/MA0737.1/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GTGGAGGGCCTG
CTTCGTGGGGGGTC--

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GTGGAGGGCCTG
BTBRAGTGSN--