Information for 21-GGGGAGTTTAGA (Motif 27)


Reverse Opposite:

p-value:1e-40
log p-value:-9.239e+01
Information Content per bp:1.974
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif0.07%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.4 +/- 48.1bp
Average Position of motif in Background63.8 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGGAGTTTAGA
TGGGGA-------

PB0203.1_Zfp691_2/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GGGGAGTTTAGA-
NTNNNAGGAGTCTCNTN

GFY(?)/Promoter/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGGGAGTTTAGA
GGGAATTGTAGT

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGGGAGTTTAGA-
NNATTGGACTTTNGNN

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGGAGTTTAGA
-GGGAATTTCC-

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGGAGTTTAGA
AAGAGGATTAG-

SMAD3/MA0795.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGGGAGTTTAGA--
----TGTCTAGACG

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGGGAGTTTAGA
-GGGAATTTCC-

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGGGAGTTTAGA----
AGGGGGATTAGCTGCC

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGGGAGTTTAGA
NTNTGGGGGGTCNNNA