Information for 20-TTCCCAGGCGCT (Motif 26)


Reverse Opposite:

p-value:1e-54
log p-value:-1.245e+02
Information Content per bp:1.877
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets94.4 +/- 49.2bp
Average Position of motif in Background94.9 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TTCCCAGGCGCT
HTTTCCCASG----

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTCCCAGGCGCT
TGCCCAGNHW--

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTCCCAGGCGCT
TTTTCCA------

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTCCCAGGCGCT
ATTTTCCATT----

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TTCCCAGGCGCT
TTGCCAAG----

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTCCCAGGCGCT
ATGCCAGACN--

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TTCCCAGGCGCT
TGCGCAGGCGC-

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTCCCAGGCGCT
TTTCCCAGAAN--

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTCCCAGGCGCT-
---CCAGACRSVB

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TTCCCAGGCGCT----
ATCCACAGGTGCGAAAA