Information for 21-TGCTAATGMR (Motif 23)


Reverse Opposite:

p-value:1e-66
log p-value:-1.532e+02
Information Content per bp:1.643
Number of Target Sequences with motif5229.0
Percentage of Target Sequences with motif7.26%
Number of Background Sequences with motif4027.7
Percentage of Background Sequences with motif5.70%
Average Position of motif in Targets100.1 +/- 56.4bp
Average Position of motif in Background99.2 +/- 63.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Oct6-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGCTAATGMR
WATGCAAATGAG

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGCTAATGMR
TATGCWAATBAV

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TGCTAATGMR-
AGNGTTCTAATGANN

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGCTAATGMR-
TTGTATGCAAATTAGA

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGCTAATGMR-
TTGTATGCAAATTAGA

POL002.1_INR/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TGCTAATGMR
-NNNANTGA-

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TGCTAATGMR-
TTGTATGCAAATTAGA

POU1F1/MA0784.1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TGCTAATGMR
AATATGCAAATTAG

POU3F2/MA0787.1/Jaspar

Match Rank:9
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGCTAATGMR
TTATGCAAATTA-

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCTAATGMR
TATGCAAAT---