Information for 17-TMCCGCTAGACC (Motif 21)


Reverse Opposite:

p-value:1e-83
log p-value:-1.915e+02
Information Content per bp:1.562
Number of Target Sequences with motif101.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets97.6 +/- 51.2bp
Average Position of motif in Background79.0 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.37
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TMCCGCTAGACC
NAACAGCTGG---

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TMCCGCTAGACC
-HCAGCTGDTN-

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TMCCGCTAGACC
TTCCCCCTAC---

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TMCCGCTAGACC
NNVCAGCTGB---

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TMCCGCTAGACC-
-----CTAGGCCT

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TMCCGCTAGACC-
TCACCTCTGGGCAG

FIGLA/MA0820.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TMCCGCTAGACC
ACCACCTGTT--

SMAD3/MA0795.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TMCCGCTAGACC
--CGTCTAGACA

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TMCCGCTAGACC--
TAAGCCACTTGAAATT

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TMCCGCTAGACC
-NCAGCTGCTG-