Information for 16-GGGAARTGTAGT (Motif 20)


Reverse Opposite:

p-value:1e-90
log p-value:-2.090e+02
Information Content per bp:1.738
Number of Target Sequences with motif564.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif205.0
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets103.0 +/- 52.0bp
Average Position of motif in Background97.2 +/- 67.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:GGGAARTGTAGT
GGGAATTGTAGT

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.80
Offset:-7
Orientation:reverse strand
Alignment:-------GGGAARTGTAGT-
GCATTCTGGGAATTGTAGTT

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GGGAARTGTAGT------
-NNNANTGCAGTGCNNTT

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGGAARTGTAGT
TGGAACAGMA--

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGGAARTGTAGT
CGGAAGTGAAAC

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGAARTGTAGT
AGAGGAAGTG----

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGGAARTGTAGT
AAAGRGGAAGTG----

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGGAARTGTAGT-
-GGAAGTGAAAST

PB0058.1_Sfpi1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GGGAARTGTAGT
TTAAGAGGAAGTTA---

NFATC1/MA0624.1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GGGAARTGTAGT
NNTGGAAANN-----