Information for 21-CGGAGGGA (Motif 18)


Reverse Opposite:

p-value:1e-119
log p-value:-2.747e+02
Information Content per bp:1.805
Number of Target Sequences with motif16174.0
Percentage of Target Sequences with motif22.45%
Number of Background Sequences with motif13396.2
Percentage of Background Sequences with motif18.97%
Average Position of motif in Targets98.8 +/- 56.3bp
Average Position of motif in Background100.4 +/- 60.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CGGAGGGA---
GGGCGGGAAGG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CGGAGGGA---
-GGCGGGAARN

E2F4/MA0470.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGGAGGGA---
GGGCGGGAAGG

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CGGAGGGA-
CWGGCGGGAA

PB0204.1_Zfp740_2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----CGGAGGGA----
ANTNCCGGGGGGAANTT

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGGAGGGA----
TGGCGGGAAAHB

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGGAGGGA---
-GGCGGGAAAH

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGAGGGA
CGGAGC--

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CGGAGGGA--
GGGCGGGACC

EBF1/MA0154.3/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGGAGGGA--
ATTCCCAAGGGAAT