Information for 14-GCAGTATT (Motif 13)


Reverse Opposite:

p-value:1e-226
log p-value:-5.224e+02
Information Content per bp:1.625
Number of Target Sequences with motif20419.0
Percentage of Target Sequences with motif28.34%
Number of Background Sequences with motif16351.6
Percentage of Background Sequences with motif23.16%
Average Position of motif in Targets100.2 +/- 56.6bp
Average Position of motif in Background100.5 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCAGTATT--
NNTNNCAATATTAG

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCAGTATT--
NNTNNCAATATTAG

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTATT---
NNNANTGCAGTGCNNTT

POL002.1_INR/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAGTATT
TCAGTCTT

PB0146.1_Mafk_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCAGTATT---
CCTTGCAATTTTTNN

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCAGTATT----
ATTTACAGTAGCAAAA

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCAGTATT----
ATGTACAGTAGCAAAG

SOX8/MA0868.1/Jaspar

Match Rank:8
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------GCAGTATT
AACAATGTGCAGTGTT

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCAGTATT----
AGGACGCTGTAAAGGGA

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCAGTATT
CACAGN---