Information for 12-GCTGAAAA (Motif 11)


Reverse Opposite:

p-value:1e-248
log p-value:-5.723e+02
Information Content per bp:1.472
Number of Target Sequences with motif31445.0
Percentage of Target Sequences with motif43.64%
Number of Background Sequences with motif26481.0
Percentage of Background Sequences with motif37.50%
Average Position of motif in Targets99.5 +/- 57.5bp
Average Position of motif in Background101.0 +/- 61.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----GCTGAAAA----
AGGACGCTGTAAAGGGA

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTGAAAA----
AAGACGCTGTAAAGCGA

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----GCTGAAAA----
AAGACGCTGTAAAGCGA

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCTGAAAA-
GGCGGGAAAH

PB0022.1_Gata5_1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GCTGAAAA------
TAAACTGATAAGAAGAT

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GCTGAAAA--
TGGCGGGAAAHB

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCTGAAAA-
--TGGAAAA

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCTGAAAA-
GGTGYTGACAGS

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCTGAAAA
RHTGWCAR

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTGAAAA-
GGCGGGAARN