Information for 8-AAAAGCAGCTTT (Motif 10)


Reverse Opposite:

p-value:1e-249
log p-value:-5.736e+02
Information Content per bp:1.965
Number of Target Sequences with motif26134.0
Percentage of Target Sequences with motif36.27%
Number of Background Sequences with motif21459.7
Percentage of Background Sequences with motif30.39%
Average Position of motif in Targets100.2 +/- 55.7bp
Average Position of motif in Background100.1 +/- 61.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl2/MA0816.1/Jaspar

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAAAGCAGCTTT-
---AGCAGCTGCT

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AAAAGCAGCTTT-
-NNAGCAGCTGCT

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAAAGCAGCTTT
---ANCAGCTG-

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AAAAGCAGCTTT
--CAGCAGCTGN

MSC/MA0665.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAAGCAGCTTT
AACAGCTGTT--

Tcf21/MA0832.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AAAAGCAGCTTT
GCAACAGCTGTTGT

GRHL1/MA0647.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAAGCAGCTTT
AAAACCGGTTTT

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AAAAGCAGCTTT
--BAACAGCTGT

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AAAAGCAGCTTT-
--NNGCAGCTGTT

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AAAAGCAGCTTT-
-----CAGCTGTT