Information for 4-AGGCCTCT (Motif 5)


Reverse Opposite:

p-value:1e-520
log p-value:-1.199e+03
Information Content per bp:1.594
Number of Target Sequences with motif47727.0
Percentage of Target Sequences with motif58.07%
Number of Background Sequences with motif40146.1
Percentage of Background Sequences with motif49.57%
Average Position of motif in Targets99.8 +/- 56.0bp
Average Position of motif in Background100.1 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTCT
CNAGGCCT--

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTCT
CTAGGCCT--

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.70
Offset:-7
Orientation:forward strand
Alignment:-------AGGCCTCT
GGGGCCGAGGCCTG-

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGGCCTCT----
AGGTCTCTAACC

PROX1/MA0794.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGGCCTCT--
TAAGGCGTCTTG

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGCCTCT-------
TGGACTTTGNNCTCN

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGGCCTCT--
AAGGCAAGTGT

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AGGCCTCT----
NNATTGGACTTTNGNN

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGCCTCT-
CTGACCTTTG

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGGCCTCT-
-GGCVGTTR