Information for 4-NDGNCAGCTG (Motif 4)


Reverse Opposite:

p-value:1e-673
log p-value:-1.550e+03
Information Content per bp:1.587
Number of Target Sequences with motif38742.0
Percentage of Target Sequences with motif47.14%
Number of Background Sequences with motif30471.1
Percentage of Background Sequences with motif37.62%
Average Position of motif in Targets100.3 +/- 53.9bp
Average Position of motif in Background99.7 +/- 63.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.42
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.86
Offset:3
Orientation:reverse strand
Alignment:NDGNCAGCTG---
---HCAGCTGDTN

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.85
Offset:3
Orientation:forward strand
Alignment:NDGNCAGCTG---
---NCAGCTGCTG

Myog/MA0500.1/Jaspar

Match Rank:3
Score:0.84
Offset:2
Orientation:forward strand
Alignment:NDGNCAGCTG---
--GACAGCTGCAG

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.84
Offset:1
Orientation:forward strand
Alignment:NDGNCAGCTG-
-NNACAGCTGC

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.84
Offset:2
Orientation:forward strand
Alignment:NDGNCAGCTG
--ANCAGCTG

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:6
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:NDGNCAGCTG----
--NVCAGCTGBBNN

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.83
Offset:2
Orientation:forward strand
Alignment:NDGNCAGCTG----
--AGCAGCTGCTNN

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.83
Offset:2
Orientation:forward strand
Alignment:NDGNCAGCTG---
--AACAGCTGCAG

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:9
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:NDGNCAGCTG-
-NNVCAGCTGB

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.83
Offset:2
Orientation:forward strand
Alignment:NDGNCAGCTG
--AACAGCTG