Information for 3-ASAGAGCRST (Motif 3)


Reverse Opposite:

p-value:1e-705
log p-value:-1.624e+03
Information Content per bp:1.514
Number of Target Sequences with motif40328.0
Percentage of Target Sequences with motif49.07%
Number of Background Sequences with motif31804.5
Percentage of Background Sequences with motif39.27%
Average Position of motif in Targets100.3 +/- 55.2bp
Average Position of motif in Background99.8 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ASAGAGCRST
ACAAAG----

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:ASAGAGCRST--
ACAAAGGNBCCT

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ASAGAGCRST-----
NNNNTGAGCACTGTNNG

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ASAGAGCRST
VRRACAAWGG---

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------ASAGAGCRST--
TGGCCACCAGGTGGCACTNT

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------ASAGAGCRST
AAACAGACAAAGGAAT

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------ASAGAGCRST----
GCCASCAGGGGGCGCYVNNG

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ASAGAGCRST
TTGAGTGSTT-

CTCF/MA0139.1/Jaspar

Match Rank:9
Score:0.53
Offset:-8
Orientation:forward strand
Alignment:--------ASAGAGCRST-
TGGCCACCAGGGGGCGCTA

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:ASAGAGCRST
---CAGCC--