Information for 25-ACCCTAACACTA (Motif 29)


Reverse Opposite:

p-value:1e-6
log p-value:-1.571e+01
Information Content per bp:1.877
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.02%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.7 +/- 53.6bp
Average Position of motif in Background122.1 +/- 40.7bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)9.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACCCTAACACTA--
AACACCAAAACAAAGGA

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:2
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACCCTAACACTA
AGGTCTCTAACC---

Spz1/MA0111.1/Jaspar

Match Rank:3
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------ACCCTAACACTA
GCTGTTACCCT-------

INSM1/MA0155.1/Jaspar

Match Rank:4
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACCCTAACACTA
CGCCCCCTGACA---

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:5
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---ACCCTAACACTA
TTCCCCCTAC-----

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---ACCCTAACACTA
CAAACAACAACACCT

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:ACCCTAACACTA
--GCTAATCC--

GSC2/MA0891.1/Jaspar

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:ACCCTAACACTA
--CCTAATCCGC

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ACCCTAACACTA---
-GCAAAACATTACTA

GCM2/MA0767.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-ACCCTAACACTA
TACCCGCATN---