Information for 19-ACTACAAHTCCC (Motif 25)


Reverse Opposite:

p-value:1e-68
log p-value:-1.584e+02
Information Content per bp:1.728
Number of Target Sequences with motif538.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif223.7
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets99.0 +/- 52.8bp
Average Position of motif in Background83.0 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:forward strand
Alignment:ACTACAAHTCCC
ACTACAATTCCC

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-ACTACAAHTCCC-------
AACTACAATTCCCAGAATGC

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACTACAAHTCCC
ATTTACGACAAATAGC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACTACAAHTCCC
NWAACCACADNN---

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:ACTACAAHTCCC--
--------TCCCCA

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---ACTACAAHTCCC
NAAACCACAG-----

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ACTACAAHTCCC
AAACCACAGC----

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ACTACAAHTCCC-
NNGGCGACACCTCNNN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ACTACAAHTCCC
AAACCACANN----

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------ACTACAAHTCCC
AATCGCACTGCATTCCG-