Information for 13-GGGGCGGGGC (Motif 19)


Reverse Opposite:

p-value:1e-176
log p-value:-4.055e+02
Information Content per bp:1.778
Number of Target Sequences with motif4038.0
Percentage of Target Sequences with motif4.91%
Number of Background Sequences with motif2482.5
Percentage of Background Sequences with motif3.07%
Average Position of motif in Targets100.9 +/- 53.7bp
Average Position of motif in Background88.4 +/- 55.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.49
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGGGC-
GGGGGCGGGGCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGGGC--
AGGGGGCGGGGCTG

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCGGGGC
GGGGGCGGGGC

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.92
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCGGGGC
GGGNGGGGGCGGGGC

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GGGGCGGGGC
GGGGNGGGGC

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---GGGGCGGGGC---
NNAGGGGCGGGGTNNA

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.89
Offset:0
Orientation:forward strand
Alignment:GGGGCGGGGC
TGGGTGGGGC

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--GGGGCGGGGC
RGKGGGCGKGGC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.88
Offset:0
Orientation:forward strand
Alignment:GGGGCGGGGC
DGGGYGKGGC

PB0202.1_Zfp410_2/Jaspar

Match Rank:10
Score:0.85
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCGGGGC--
NNTNNGGGGCGGNGNGN