Information for 19-GAGTCATT (Motif 18)


Reverse Opposite:

p-value:1e-200
log p-value:-4.609e+02
Information Content per bp:1.516
Number of Target Sequences with motif25867.0
Percentage of Target Sequences with motif31.47%
Number of Background Sequences with motif21648.6
Percentage of Background Sequences with motif26.73%
Average Position of motif in Targets100.8 +/- 56.9bp
Average Position of motif in Background99.8 +/- 60.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:GAGTCATT
--GTCATN

BATF::JUN/MA0462.1/Jaspar

Match Rank:2
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GAGTCATT--
TGAGTCATTTC

FOS::JUN/MA0099.2/Jaspar

Match Rank:3
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GAGTCATT
TGAGTCA--

JDP2/MA0655.1/Jaspar

Match Rank:4
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCATT
ATGAGTCAT-

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GAGTCATT
GATGAGTCAT-

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCATT
ATGASTCATH

JUNB/MA0490.1/Jaspar

Match Rank:7
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCATT-
ATGAGTCATCN

FOSL2/MA0478.1/Jaspar

Match Rank:8
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCATT-
NTGAGTCATCN

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:9
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----GAGTCATT
NDATGASTCATH

JUN(var.2)/MA0489.1/Jaspar

Match Rank:10
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GAGTCATT----
ATGAGTCATNTNNT