Information for 13-CGCTTTCA (Motif 12)


Reverse Opposite:

p-value:1e-302
log p-value:-6.964e+02
Information Content per bp:1.593
Number of Target Sequences with motif35333.0
Percentage of Target Sequences with motif42.99%
Number of Background Sequences with motif29703.8
Percentage of Background Sequences with motif36.67%
Average Position of motif in Targets99.6 +/- 56.8bp
Average Position of motif in Background100.2 +/- 62.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CGCTTTCA--
TGGTTTCAGT

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGCTTTCA-
-GCTGTCAA

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTTCA-----
TNCCTTTGATCTTN

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CGCTTTCA---
-CCTTTGATGT

PH0169.1_Tgif1/Jaspar

Match Rank:5
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CGCTTTCA-----
NNNCAGCTGTCAATATN

PRDM1/MA0508.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTTCA------
TCACTTTCACTTTCN

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CGCTTTCA-----
-ACTTTCACTTTC

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGCTTTCA------
GACCACATTCATACAAT

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGCTTTCA---
TNCCTTTGATGT

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGCTTTCA-
-CCTGTCAA