Information for 9-GGCTTTGTTC (Motif 8)


Reverse Opposite:

p-value:1e-190
log p-value:-4.394e+02
Information Content per bp:1.594
Number of Target Sequences with motif22243.0
Percentage of Target Sequences with motif28.32%
Number of Background Sequences with motif18521.6
Percentage of Background Sequences with motif23.75%
Average Position of motif in Targets100.1 +/- 55.1bp
Average Position of motif in Background99.9 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.86
Offset:1
Orientation:forward strand
Alignment:GGCTTTGTTC-
-YCTTTGTTCC

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GGCTTTGTTC-
-CCTTTGTTTT

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GGCTTTGTTC-
-CCWTTGTYYB

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.78
Offset:2
Orientation:forward strand
Alignment:GGCTTTGTTC
--CTTTGT--

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GGCTTTGTTC----
TNNTCCTTTGTTCTNNT

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GGCTTTGTTC----
NNNTCCTTTGTTCTNNN

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:GGCTTTGTTC-
-CCATTGTTTT

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GGCTTTGTTC
AGGVNCCTTTGT--

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GGCTTTGTTC
-CCTTTGTT-

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:10
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGCTTTGTTC
-CCWTTGTY-