Information for 3-CTCTCARTGG (Motif 4)


Reverse Opposite:

p-value:1e-278
log p-value:-6.403e+02
Information Content per bp:1.550
Number of Target Sequences with motif40080.0
Percentage of Target Sequences with motif51.02%
Number of Background Sequences with motif34848.5
Percentage of Background Sequences with motif44.68%
Average Position of motif in Targets99.9 +/- 55.4bp
Average Position of motif in Background99.9 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:CTCTCARTGG-------
--CTGATTGGTCNATTT

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CTCTCARTGG--
--CCGATTGGCT

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:CTCTCARTGG-----
---TGATTGGCTANN

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CTCTCARTGG----
AGAGTGCTGATTGGTCCA

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTCTCARTGG--
--TTRAGTGSYK

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CTCTCARTGG------
CAATCACTGGCAGAAT

PB0028.1_Hbp1_1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTCTCARTGG-----
ACTATGAATGAATGAT

Nkx3-1/MA0124.2/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTCTCARTGG-
--TTAAGTGGT

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCARTGG-----
NNTNNACAATGGGANNN

Dux/MA0611.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CTCTCARTGG
--TTGATTGN