Information for 23-CCATTCGATGAT (Motif 28)


Reverse Opposite:

p-value:1e-26
log p-value:-6.111e+01
Information Content per bp:1.813
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.04%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets99.2 +/- 56.0bp
Average Position of motif in Background67.7 +/- 37.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)2.44
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF410/MA0752.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCATTCGATGAT----
TCCATCCCATAATACTC

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCATTCGATGAT-
NNNTCCATCCCATAANN

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CCATTCGATGAT-
AATCAATTCAATAATT

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCATTCGATGAT--------
---TNNNATGATTTCNNCNN

PB0005.1_Bbx_1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCATTCGATGAT---
TAATTCAATGAAGTG

PB0028.1_Hbp1_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCATTCGATGAT---
NNCATTCATTCATNNN

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCATTCGATGAT-
ATAACCACTTGAAAATT

TEAD1/MA0090.2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCATTCGATGAT
CACATTCCAT---

PAX7/MA0680.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCATTCGATGAT
-TAATCGATTA-

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CCATTCGATGAT
------CATGAC