Information for 21-TGACCAGAAAAC (Motif 27)


Reverse Opposite:

p-value:1e-29
log p-value:-6.802e+01
Information Content per bp:1.890
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif0.06%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets95.1 +/- 56.1bp
Average Position of motif in Background112.4 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0001.1_ETS_class/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGACCAGAAAAC
--ACCGGAAG--

Mecom/MA0029.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGACCAGAAAAC-
AAGATAAGATAACA

PB0108.1_Atf1_2/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGACCAGAAAAC
GAATGACGAATAAC-

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGACCAGAAAAC
TGCCCAGNHW--

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGACCAGAAAAC
CGTCTAGACA--

FLI1/MA0475.2/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TGACCAGAAAAC
--ACCGGAAGTG

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TGACCAGAAAAC
NNNNTGACCCGGCGCG

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGACCAGAAAAC
NWAACCACADNN-

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TGACCAGAAAAC
TAAACTGATAAGAAGAT

ETV2/MA0762.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGACCAGAAAAC
-AACCGGAAATA