Information for 17-TGGKCTAGCGGT (Motif 25)


Reverse Opposite:

p-value:1e-58
log p-value:-1.340e+02
Information Content per bp:1.837
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.3 +/- 44.7bp
Average Position of motif in Background145.1 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TGGKCTAGCGGT--
-----TTGCGGTTT

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TGGKCTAGCGGT--
----TTTGCGGTTT

ZBTB33/MA0527.1/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGGKCTAGCGGT-----
--CTCTCGCGAGATCTG

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGGKCTAGCGGT
GTGGCGTGACNG-

PB0046.1_Mybl1_1/Jaspar

Match Rank:5
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TGGKCTAGCGGT------
-NNANTAACGGTTNNNAN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TGGKCTAGCGGT
TGGGTGTGGC---

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.48
Offset:2
Orientation:forward strand
Alignment:TGGKCTAGCGGT-------
--GGCGAGGGGTCAAGGGC

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----TGGKCTAGCGGT
GCGGAGGTGTCGCCTC

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TGGKCTAGCGGT
AGGCCTAG----

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:TGGKCTAGCGGT------
-NNNNTAACGGTTNNNAN