Information for 22-CTATTGTG (Motif 24)


Reverse Opposite:

p-value:1e-66
log p-value:-1.524e+02
Information Content per bp:1.592
Number of Target Sequences with motif10740.0
Percentage of Target Sequences with motif13.67%
Number of Background Sequences with motif9088.9
Percentage of Background Sequences with motif11.65%
Average Position of motif in Targets100.4 +/- 56.8bp
Average Position of motif in Background100.4 +/- 57.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CTATTGTG----
NNNCCATTGTGTNAN

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---CTATTGTG------
CNNNTATTGTTCNNNNN

SOX9/MA0077.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:forward strand
Alignment:CTATTGTG-
CCATTGTTC

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CTATTGTG
CTCATTGTC

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.77
Offset:0
Orientation:forward strand
Alignment:CTATTGTG--
CCATTGTTNY

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CTATTGTG------
AATCAATTGTTCCGCTA

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-CTATTGTG-
NCCATTGTTY

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.75
Offset:0
Orientation:forward strand
Alignment:CTATTGTG
CCWTTGTY

PB0073.1_Sox7_1/Jaspar

Match Rank:9
Score:0.75
Offset:-7
Orientation:reverse strand
Alignment:-------CTATTGTG-------
TNNANNTCTATTGTTNTNNANN

PB0065.1_Sox15_1/Jaspar

Match Rank:10
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----CTATTGTG-----
ANNTCTATTGTTCNNNA