Information for 17-CAGTCCAAAT (Motif 19)


Reverse Opposite:

p-value:1e-83
log p-value:-1.913e+02
Information Content per bp:1.647
Number of Target Sequences with motif6544.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif5112.1
Percentage of Background Sequences with motif6.55%
Average Position of motif in Targets100.6 +/- 55.9bp
Average Position of motif in Background99.7 +/- 59.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CAGTCCAAAT-
GGCAAAAGTCCAATAA

TEAD3/MA0808.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGTCCAAAT
ACATTCCA---

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCCAAAT
GCATTCCAGN-

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGTCCAAAT
TCCAATCCACA-

TEAD1/MA0090.2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGTCCAAAT
CACATTCCAT--

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCCAAAT-
SSAATCCACANN

TEAD4/MA0809.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGTCCAAAT
CACATTCCAT--

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAGTCCAAAT----
AGAGTCCAAAGTCCA

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGTCCAAAT-
-ACATCAAAGG

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGTCCAAAT
-NATTCAAAT