Information for 13-GCGGAGTGAA (Motif 12)


Reverse Opposite:

p-value:1e-123
log p-value:-2.854e+02
Information Content per bp:1.531
Number of Target Sequences with motif25491.0
Percentage of Target Sequences with motif32.45%
Number of Background Sequences with motif22292.0
Percentage of Background Sequences with motif28.58%
Average Position of motif in Targets100.2 +/- 55.6bp
Average Position of motif in Background100.1 +/- 58.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0013.1_Eomes_1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCGGAGTGAA----
GAAAAGGTGTGAAAATT

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCGGAGTGAA
AAGGTGTGAA

TBX20/MA0689.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCGGAGTGAA-
TAGGTGTGAAG

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCGGAGTGAA-
-AGGTGTGAAA

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCGGAGTGAA---
AAGGTGTGAAAAT

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCGGAGTGAA--
GTGGCGTGACNG

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGGAGTGAA
ATGGGGTGAT

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCGGAGTGAA
-AGGTGTGA-

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGGAGTGAA
TGCTGAGTCA-

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCGGAGTGAA--
CGGAAGTGAAAC