Information for 10-AGGGAGAG (Motif 11)


Reverse Opposite:

p-value:1e-162
log p-value:-3.749e+02
Information Content per bp:1.830
Number of Target Sequences with motif20522.0
Percentage of Target Sequences with motif26.13%
Number of Background Sequences with motif17172.6
Percentage of Background Sequences with motif22.02%
Average Position of motif in Targets100.2 +/- 55.5bp
Average Position of motif in Background99.9 +/- 57.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF5/MA0599.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGGGAGAG--
GGGGNGGGGC

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----AGGGAGAG-----
NNNAAGGGGGCGGGNNN

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGGGAGAG--
DGGGYGKGGC

Klf4/MA0039.2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AGGGAGAG--
TGGGTGGGGC

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGGGAGAG-
GAAAGTGAAAGT

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGGAGAG---
TGGGTGTGGCN

SP3/MA0746.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGGAGAG--
GGGGGCGTGGN

KLF16/MA0741.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGGAGAG--
GGGGGCGTGGC

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGAGAG--
NNNACCGAGAGTNNN

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGGAGAG-
-GGGGGGGG