Information for 11-AAAGCACAGT (Motif 9)


Reverse Opposite:

p-value:1e-429
log p-value:-9.898e+02
Information Content per bp:1.532
Number of Target Sequences with motif52750.0
Percentage of Target Sequences with motif51.85%
Number of Background Sequences with motif44909.9
Percentage of Background Sequences with motif44.91%
Average Position of motif in Targets99.8 +/- 55.8bp
Average Position of motif in Background100.1 +/- 63.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AAAGCACAGT
NAAACCACAG-

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAAGCACAGT
AAACCACAGC

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AAAGCACAGT-
AAATCACAGCA

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAAGCACAGT-
AAACCACAGAN

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAAGCACAGT
AAACCACANN

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAAGCACAGT-
NWAACCACADNN

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAGCACAGT
CCAGGAACAG-

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAGCACAGT
CAAATCACTG-

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:AAAGCACAGT
----CACAGN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAGCACAGT
AAATCACTGC