Information for 7-GAACAGTGCC (Motif 6)


Reverse Opposite:

p-value:1e-605
log p-value:-1.393e+03
Information Content per bp:1.456
Number of Target Sequences with motif45913.0
Percentage of Target Sequences with motif45.13%
Number of Background Sequences with motif37054.8
Percentage of Background Sequences with motif37.05%
Average Position of motif in Targets101.0 +/- 56.0bp
Average Position of motif in Background100.7 +/- 62.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAACAGTGCC------
CGAACAGTGCTCACTAT

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GAACAGTGCC----
-----ATGCCCACC

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAACAGTGCC--
RGTTAGTGCCCY

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAACAGTGCC
VRRACAAWGG-

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GAACAGTGCC
CCAGGAACAG----

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAACAGTGCC
GAACAATGGN

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAACAGTGCC
AAAACAATGG-

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAACAGTGCC
RAACAATGGN

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAACAGTGCC
GGAACAAAGR-

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GAACAGTGCC----
-----ATGCCAACC