Information for 4-AAAAGGCTYT (Motif 3)


Reverse Opposite:

p-value:1e-899
log p-value:-2.072e+03
Information Content per bp:1.460
Number of Target Sequences with motif64335.0
Percentage of Target Sequences with motif63.24%
Number of Background Sequences with motif53262.3
Percentage of Background Sequences with motif53.26%
Average Position of motif in Targets99.9 +/- 55.5bp
Average Position of motif in Background100.2 +/- 64.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.51
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AAAAGGCTYT
----NGCTN-

MSC/MA0665.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAAAGGCTYT-
-AACAGCTGTT

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AAAAGGCTYT-
-----GCTGTG

Nr2e3/MA0164.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAAAGGCTYT
--CAAGCTT-

Tcf21/MA0832.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAAAGGCTYT---
GCAACAGCTGTTGT

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AAAAGGCTYT---
AGAAATGACTTCCCT

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAAAGGCTYT
BAACAGCTGT

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AAAAGGCTYT-
---AGGCCTNG

MYF6/MA0667.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAAAGGCTYT-
-AACAGCTGTT

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AAAAGGCTYT------
AAGCACCTGTCAATAT