Information for 19-GGGGAAAAAAAA (Motif 21)


Reverse Opposite:

p-value:1e-91
log p-value:-2.104e+02
Information Content per bp:1.703
Number of Target Sequences with motif4999.0
Percentage of Target Sequences with motif4.91%
Number of Background Sequences with motif3657.0
Percentage of Background Sequences with motif3.66%
Average Position of motif in Targets99.2 +/- 56.1bp
Average Position of motif in Background99.7 +/- 64.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0186.1_Tcf3_2/Jaspar

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAAAAAAA--
AGCCGAAAAAAAAAT

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--GGGGAAAAAAAA
TACTGGAAAAAAAA

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GGGGAAAAAAAA-----
GTTAAAAAAAAAAATTA

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGGGAAAAAAAA
-TGGAAAA----

NFATC3/MA0625.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAAAAAAAA
AATGGAAAAT---

PB0116.1_Elf3_2/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGGGAAAAAAAA-----
GTTCAAAAAAAAAATTC

MZF1/MA0056.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGGAAAAAAAA
TGGGGA-------

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAAAAAAAA
NATGGAAAAN---

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAAAAAAAA
NNTGGAAANN---

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAAAAAAAA
AATGGAAAAT---